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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930704.1_cds_XP_016477717.1_69417
CDS Infomation

[gene=LOC107799147] [db_xref=GeneID:107799147] [protein=subtilisin-like protease SBT2.2] [protein_id=XP_016477717.1] [location=join(40381..40607,41596..41749,41880..42277,43189..43284,44086..44158,44247..44299,44404..44633,46685..47004,47149..47419,47550..47831,50162..50583)] [gbkey=CDS]
Sequence

ATGCTCAAAATGGAGAGGTCTATTTGGTTCAGTTTCTTAATGGGGGTGTTATTTTTGGTG
AATTTTGTGGGTTGTGGCTGGTCTCAAGAGAATGCTGATTCAGCTACTGCGTCAGTGTAT
ATTGTGACTCTGAAAAAACCTCCTATTTCTCATTTTTATGGAGAACTGAGGGTGAAGAAT
CAACACCACTCCACAAATGGTAGAGTTACCAGACTGGACATACCAAGCAATGTTTCGCAT
ATAGATCGAATGAATGGTTCCTACGTTTCTCAAATGCATGATTCTTTATTGAGGAGGGCA
TTAAGAGGAGAAAAGTATCTAAAAGTTTGCAGCTACCACTACTTGATCAATGGATTTGCT
GTGCTTGTAACACCTCTGCAGGCTTTCAAGCTTGCAAGGAGGAGAGAAGTGTCAAATATT
GTTTTGGATTTCTCCGTCAGAACTGCTACTACACATACACCAGAGTTCCTAGGTCTACCT
CGTGGGGCATGGGCTCAAGAAGGTGGATATCGAACTGCGGGGGAAGGCGTTGTGATTGGT
TTCATTGACACTGGAATTGATCCTACACACCCCAGCTTTTCCGATAATTCACATGAGCAA
ACATATCCTGTTCCCGAGCACTTTTCTGGCATTTGTGAGGTCACTCAAGATTTTCCATCC
GGATCTTGCAACAGGAAGCTTGTCGGTGCCCGTCATTTTGCAGCATCTGCTATAACCAGG
GGGATATTTAATGCAACTAAGGACTATGCTTCTCCTTTTGATGGTGATGGTCACGGAACG
CATACAGCTTCTATTGCGGCAGGGAACCATGGGATCCCCGTTATTGTAGCTGGACATAAC
TTTGGAAATGCTAGTGGAATGGCTCCTCATTCACACATTGCAGTTTACAAGGCATTATAC
AAGAGTTTCGGTGGCTTTGCTGCAGATGTCGTTGCTGCCATAGACCAGAGAGGAAAGGAA
ACAGATATACTGCAGATTTTGTTAGCATATCTTGGGAAAATAATAGAATGGAAAGCAGGT
CAAGTTTCTAAGGATGGAGGGCACATTCATTTGTCCTCATATATATNCATTTTTGTAGTA
CAAGCAGCTGGCAATACTGGACCATCACCTAAGACTGTTGCTTCCTTCAGCCCATGGATC
TTCACTGTCGGTGCTTCAACCCATGACAGGGTTTACAGTAACTCTATAGTGCTGGGCAAC
AACATCACCATATCTGGAGTTGGACTTGCGCCTGGAACCGATGGCATGTACACGCTGGTT
TCTGCAATTCATGCTTTGAATGATACAGCTGCTAAAGATATGTATGTCAGTGAATGCCAA
GATGCCAGTAAGTTTAATCAAACTCTCGTTCAAGGGAATCTCTTACTTTGTAGCTACTCC
ATCCGGTTTGTGCTTGGGCTTTCCACCATTAAACAGGCCTCGGAAACTGCTGAGAACCTT
AGTGCAGCTGGAGTTGTATTTTCCATGGATCCTTTTGTTATCAGTTTTCAACTTAATCCG
GTTCCAATGAGATTGCCTGGAATTATAATTCCTTCCCAAGATGATTCTAAGATTTTACTT
CAGTACTACAATTCTTCACTGGAGGAAGATGAAACTACAAAGAAAATTGTTAAGTTTGGG
GCAGTAGCCCGCATTTCAGGGGGAATAAAAGCTAATTTCAGCTTATCTGCTCCGAAGGTT
ATGTACTATTCTGCAAGGGGACCAGATCCAGAAGACAGTTCTGTGGATGATGCAGACATA
TTGAAACCCAACCTAGTTGCTCCAGGAAATTCTGTATGGGCTGCTTGGAGTTCCCATGGT
GCTGAATCGATTGAATTTCAAGGTGAAAGCTTTGCAATGATGTCCGGTACAAGCATGGCT
GCGCCCCATATTGCTGGTTTAGCAGCCTTGATTAAGCAAAGATTCCCCACCTTTAGTCCT
GCTGCAATTGGATCTGCCCTTTCTACAACAGCCTCTCTCCGTAATAAATATGGGGGCCCA
ATATTAGCCCAGCGTGCATATGCTAACCCAGATTCAAACCAGTCTCCTGCAACACCTTTT
GACATGGGAAGTGGATTCGTGAATGCTACTGCAGCACTGGATCCAGGCCTTATTCTTGAT
ACAAGTTATAACGACTACATGGCATTCCTCTGTGGCATAAATGGATCAGCTCCTGTGCTT
CTGAACTACACTGGTGAGAGCTGTGGGGTCTCTACTATGAATGGAATTGACCTGAACATG
CCTTCAATCACAATATCAAAGCTGAACCAATCAAGAAAAGTTCAAAGAGCAATGACCAAC
ATAGCTGGCAATGAAACATATATCGTCGGTTGGAGTGCACCTTATGGAGTTTCTGTTAAG
GTTATCCCAAAGCGATTTTTTGTTGCAAGTGGACAGCAGCAGGTCTTGAATGTGTTCTTC
AACGCTACCATGAATAATAGTACAGCAAGCTTTGGAAGAATTGGACTAGTGGGAAATCAA
GGTCATGTTGTAAACATTCCTTTGTCGGTCATAGTAAAAATCTCATACCACTCAACTAAC
AGCTGA

Peptide Sequence

PEP ID

XP_016477717.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT2.2 [Nicotiana tabacum]
Sequence

MLKMERSIWFSFLMGVLFLVNFVGCGWSQENADSATASVYIVTLKKPPISHFYGELRVKN
QHHSTNGRVTRLDIPSNVSHIDRMNGSYVSQMHDSLLRRALRGEKYLKVCSYHYLINGFA
VLVTPLQAFKLARRREVSNIVLDFSVRTATTHTPEFLGLPRGAWAQEGGYRTAGEGVVIG
FIDTGIDPTHPSFSDNSHEQTYPVPEHFSGICEVTQDFPSGSCNRKLVGARHFAASAITR
GIFNATKDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHNFGNASGMAPHSHIAVYKALY
KSFGGFAADVVAAIDQRGKETDILQILLAYLGKIIEWKAGQVSKDGGHIHLSSYIXIFVV
QAAGNTGPSPKTVASFSPWIFTVGASTHDRVYSNSIVLGNNITISGVGLAPGTDGMYTLV
SAIHALNDTAAKDMYVSECQDASKFNQTLVQGNLLLCSYSIRFVLGLSTIKQASETAENL
SAAGVVFSMDPFVISFQLNPVPMRLPGIIIPSQDDSKILLQYYNSSLEEDETTKKIVKFG
AVARISGGIKANFSLSAPKVMYYSARGPDPEDSSVDDADILKPNLVAPGNSVWAAWSSHG
AESIEFQGESFAMMSGTSMAAPHIAGLAALIKQRFPTFSPAAIGSALSTTASLRNKYGGP
ILAQRAYANPDSNQSPATPFDMGSGFVNATAALDPGLILDTSYNDYMAFLCGINGSAPVL
LNYTGESCGVSTMNGIDLNMPSITISKLNQSRKVQRAMTNIAGNETYIVGWSAPYGVSVK
VIPKRFFVASGQQQVLNVFFNATMNNSTASFGRIGLVGNQGHVVNIPLSVIVKISYHSTN
S

Transcript Sequence

Gene sequence data has not been registered.